PDBsum entry 8jii Go to PDB code:  Pore analysis for: 8jii calculated with MOLE 2.0 PDB id 8jii Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.23 31.5 -1.41 -0.49 11.4 83 3 2 2 0 2 1 0   2 2.57 3.42 44.0 -1.11 -0.44 17.6 82 8 1 2 4 1 0 0   3 1.39 1.39 66.0 -1.75 -0.45 15.6 86 7 2 7 3 3 1 0   4 1.35 1.80 95.8 -1.32 -0.31 20.0 82 9 4 6 7 2 2 1   5 1.21 1.64 208.1 -0.88 -0.34 15.0 85 13 9 10 19 8 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.