 |
PDBsum entry 8jei
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8jei calculated with  MOLE 2.0
|
PDB id
|
|
|
|
8jei
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 pores,
coloured by radius |
|
4 pores,
coloured by radius
|
4 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.24 |
1.40 |
84.3 |
-1.64 |
-0.53 |
17.7 |
88 |
|
11 |
4 |
10 |
5 |
3 |
1 |
0 |
|
|
 |
|
2 |
 |
1.16 |
1.16 |
112.7 |
-1.36 |
-0.51 |
19.8 |
86 |
12 |
7 |
6 |
8 |
1 |
1 |
0 |
|
|
3 |
 |
2.17 |
3.02 |
39.5 |
-1.23 |
-0.43 |
16.2 |
83 |
7 |
2 |
5 |
3 |
2 |
1 |
2 |
|
 |
4 |
 |
1.95 |
3.46 |
40.1 |
-2.04 |
-0.44 |
25.8 |
83 |
6 |
2 |
2 |
5 |
0 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program