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PDBsum entry 8izb

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8izb calculated with MOLE 2.0 PDB id
8izb
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.88 3.32 25.4 -1.75 -0.39 23.9 85 6 2 3 4 1 0 0  
2 2.87 3.33 49.3 -1.79 -0.27 25.6 84 9 2 3 4 2 0 0  
3 1.83 2.19 72.7 -1.39 -0.15 17.4 79 10 2 4 4 4 1 0  
4 2.42 2.88 112.2 -2.18 -0.45 25.5 86 11 5 6 4 2 1 1  
5 1.31 1.48 196.7 -0.80 0.01 17.0 85 14 4 6 18 4 1 0  UBL 501 R CLR 504 R
6 1.87 1.85 31.7 -2.02 -0.62 15.7 82 3 3 5 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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