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PDBsum entry 8iys

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8iys calculated with MOLE 2.0 PDB id
8iys
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.43 27.1 -0.85 -0.17 12.2 89 4 1 5 2 3 0 0  
2 1.73 1.80 36.9 -2.67 -0.19 34.0 76 4 3 0 1 2 0 0  
3 2.32 3.72 37.8 -1.26 -0.41 15.5 81 6 2 5 2 3 2 2  
4 1.75 1.75 46.4 -1.91 -0.66 23.1 85 6 3 3 2 1 0 0  GDP 401 A
5 2.13 2.22 88.6 -1.33 -0.32 18.0 87 9 8 6 5 2 1 0  
6 1.34 1.53 32.4 -0.79 -0.27 16.2 85 3 2 2 4 0 0 0  
7 2.19 2.36 33.7 -0.98 -0.43 13.9 85 4 1 2 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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