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PDBsum entry 8ix1
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Pore analysis for: 8ix1 calculated with  MOLE 2.0
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PDB id
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8ix1
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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12 pores,
coloured by radius
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12 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.58 |
3.30 |
33.8 |
-0.40 |
0.05 |
18.2 |
74 |
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2 |
3 |
0 |
6 |
3 |
1 |
0 |
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CHL 601 G XAT 616 G LHG 618 G CLA 603 Y CHL 608 Y
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2 |
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1.79 |
2.01 |
34.0 |
-0.40 |
0.06 |
17.4 |
77 |
2 |
2 |
0 |
5 |
2 |
1 |
0 |
CHL 607 Y CLA 609 Y
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3 |
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2.18 |
2.62 |
37.5 |
-0.40 |
0.46 |
18.7 |
71 |
2 |
2 |
1 |
5 |
3 |
0 |
0 |
CHL 601 G CLA 602 G CLA 603 G LUT 615 G CLA 304 N
CLA 602 Y CLA 603 Y CHL 608 Y LUT 615 Y
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4 |
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1.82 |
2.01 |
45.0 |
0.04 |
0.31 |
15.5 |
69 |
2 |
2 |
0 |
7 |
4 |
1 |
0 |
CHL 601 G XAT 616 G LHG 618 G CLA 603 Y CHL 607 Y
CHL 608 Y CLA 609 Y
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5 |
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1.93 |
2.84 |
49.3 |
-0.91 |
-0.39 |
8.7 |
80 |
1 |
1 |
4 |
4 |
5 |
0 |
0 |
CHL 308 N CLA 314 N CLA 315 N LHG 320 N XAT 321 N
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6 |
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2.12 |
2.43 |
58.0 |
-0.76 |
0.32 |
15.6 |
66 |
4 |
2 |
1 |
6 |
8 |
2 |
0 |
CHL 608 G CHL 302 N CLA 303 N CLA 312 N CLA 314 N
CLA 315 N LHG 320 N XAT 321 N
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7 |
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1.69 |
1.80 |
58.9 |
-0.26 |
0.01 |
11.7 |
76 |
3 |
3 |
0 |
6 |
2 |
2 |
0 |
CLA 304 N CHL 309 N CHL 310 N CHL 601 Y CLA 602 Y
LUT 615 Y
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8 |
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1.48 |
1.56 |
62.1 |
-1.26 |
-0.04 |
16.1 |
75 |
3 |
5 |
2 |
3 |
4 |
2 |
0 |
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9 |
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1.49 |
1.56 |
63.3 |
-1.63 |
-0.02 |
21.8 |
67 |
5 |
5 |
1 |
2 |
8 |
2 |
0 |
CLA 602 Y CLA 610 Y
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10 |
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2.17 |
2.73 |
77.8 |
-0.14 |
0.60 |
12.6 |
70 |
4 |
2 |
2 |
9 |
7 |
0 |
0 |
CLA 603 G CHL 608 G CHL 302 N CLA 303 N CLA 304 N
CHL 310 N CLA 312 N CLA 314 N CLA 315 N LUT 317 N
LHG 320 N XAT 321 N CHL 601 Y CLA 602 Y LUT 615 Y
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11 |
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1.66 |
1.76 |
98.5 |
-0.16 |
0.27 |
12.4 |
73 |
4 |
3 |
2 |
12 |
6 |
2 |
0 |
CLA 603 G CHL 608 G CHL 302 N CLA 303 N CLA 304 N
CHL 309 N CHL 310 N CLA 312 N CLA 314 N CLA 315 N
LUT 317 N LHG 320 N XAT 321 N CHL 601 Y CLA 602 Y
LUT 615 Y
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12 |
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2.49 |
2.69 |
108.6 |
0.30 |
0.42 |
12.1 |
76 |
4 |
5 |
2 |
15 |
5 |
1 |
0 |
CHL 601 G CLA 602 G CLA 603 G CHL 608 G LUT 615 G
CHL 301 N CHL 302 N CLA 303 N CLA 304 N CLA 312 N
CLA 314 N CLA 315 N LUT 317 N LHG 320 N XAT 321 N
CLA 603 Y CHL 608 Y
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program