PDBsum entry 8irj

Pore analysis for: 8irj calculated with

MOLE 2.0

PDB id

8irj

Pores calculated on whole structure

Pores calculated excluding ligands

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16 pores, coloured by radius

16 pores, coloured by radius

16 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.26

2.01

34.1

0.90

0.22

8.2

72

5

1

0

8

0

2

2

2

1.07

1.67

36.3

-0.56

0.14

24.4

69

4

2

0

7

1

1

1

3

1.07

1.65

37.8

0.28

0.16

16.8

75

4

2

0

9

1

0

2

4

1.08

1.77

40.4

0.60

0.32

16.5

72

4

2

0

11

1

1

2

5

1.06

1.66

41.4

0.05

0.22

20.2

70

4

2

0

11

1

2

1

6

1.08

1.80

46.2

-0.14

0.12

17.2

68

5

3

0

10

1

3

1

7

1.09

1.67

55.6

0.55

0.30

13.3

71

3

2

0

16

2

0

2

8

1.26

2.05

69.4

0.51

0.49

12.7

75

8

0

0

12

6

1

2

9

1.32

2.87

70.2

0.66

0.53

12.7

73

7

0

0

12

6

2

1

10

1.28

1.89

76.1

0.75

0.45

11.9

75

6

1

0

15

5

2

1

11

1.25

2.06

85.4

0.41

0.26

11.6

74

8

0

0

14

7

1

2

12

1.37

3.01

87.4

-0.13

0.16

14.2

70

9

1

0

13

8

3

1

13

1.15

1.97

37.6

-1.41

-0.53

11.0

78

1

2

3

2

1

3

0

14

1.17

1.84

67.7

-1.30

-0.61

11.8

86

3

4

6

5

1

4

0

15

1.34

1.33

68.5

-1.51

-0.41

17.6

78

3

4

3

2

1

3

0

16

1.10

1.38

30.0

-1.24

-0.63

16.5

83

1

3

3

3

0

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.