spacer
spacer

PDBsum entry 8ihh

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8ihh calculated with MOLE 2.0 PDB id
8ihh
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.63 1.79 26.4 -1.17 -0.14 13.4 89 4 1 6 2 3 0 0  
2 1.24 1.24 26.4 -1.08 -0.59 10.9 79 1 2 1 1 2 1 0  
3 1.22 1.22 29.9 -1.15 -0.46 11.0 79 2 2 2 2 2 1 0  
4 1.78 1.95 33.7 -2.34 -0.50 31.1 82 5 5 2 0 1 0 0  
5 2.03 2.49 35.5 -0.59 -0.33 14.7 85 5 1 1 6 0 0 0  
6 2.06 2.40 40.5 -1.11 -0.46 18.8 84 6 3 2 5 0 0 0  
7 1.18 1.18 77.3 -1.45 -0.43 18.2 89 9 3 7 7 0 1 0  
8 2.01 2.07 30.9 -1.65 -0.58 20.1 95 3 1 2 2 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer