PDBsum entry 8iep Go to PDB code:  Tunnel analysis for: 8iep calculated with MOLE 2.0 PDB id 8iep Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.63 2.11 33.2 0.07 0.32 9.3 78 3 0 3 7 3 1 1  PC1 601 C 2 1.63 2.11 34.6 0.09 0.46 10.3 75 3 0 1 6 6 0 0  PC1 601 C 3 1.67 2.14 37.0 1.18 0.62 3.8 60 1 0 0 10 3 0 2  PC1 601 C 4 1.67 2.15 41.1 1.01 0.72 4.8 60 1 0 0 11 4 0 2  PC1 601 C 5 1.63 2.11 44.7 0.12 0.43 10.6 77 4 1 2 7 8 0 0  PC1 601 C PC1 601 D 6 1.64 2.12 46.0 0.25 0.37 8.2 82 3 1 4 7 6 0 0  PC1 601 C PC1 601 D 7 1.20 1.19 72.1 1.60 0.62 4.4 64 2 0 0 24 5 1 1  PC1 601 C PC1 601 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.