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PDBsum entry 8ieb

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8ieb calculated with MOLE 2.0 PDB id
8ieb
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.62 5.31 34.1 0.15 0.10 8.8 91 2 1 3 3 3 0 0  PC1 601 A PC1 601 B
2 2.23 2.68 36.8 0.54 0.46 9.4 75 4 0 2 9 2 0 2  PC1 601 B
3 2.50 2.55 42.5 -0.17 0.18 13.0 84 5 0 3 5 3 0 2  PC1 601 A PC1 601 B
4 1.52 1.64 44.9 -0.19 0.07 9.8 73 4 2 2 7 4 1 2  PC1 601 A
5 1.63 1.63 48.9 0.67 0.51 7.2 74 4 0 2 10 3 0 2  PC1 601 B
6 1.54 1.65 50.0 -0.49 0.15 11.8 83 2 2 2 5 6 0 0  PC1 601 A PC1 601 B
7 2.24 2.62 50.6 0.54 0.41 7.5 82 4 0 3 12 5 0 0  PC1 601 A PC1 601 B
8 2.54 2.56 52.0 -0.69 0.06 16.4 85 6 2 4 4 3 0 2  PC1 601 A PC1 601 B
9 1.54 1.66 57.2 0.20 0.31 10.1 77 3 1 1 9 7 0 1  PC1 601 A PC1 601 B
10 2.51 2.56 61.3 -0.99 0.04 18.4 82 8 1 5 3 4 1 2  PC1 601 A PC1 601 B
11 1.54 1.66 62.2 -0.04 0.21 11.0 74 4 2 2 6 5 2 1  PC1 601 A
12 1.74 1.78 72.3 -0.82 -0.08 13.9 82 6 1 4 4 5 2 0  PC1 601 A PC1 601 B
13 1.25 1.34 31.5 -0.76 -0.33 12.2 84 4 0 5 5 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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