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PDBsum entry 8id8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8id8 calculated with MOLE 2.0 PDB id
8id8
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.12 3.30 25.9 -0.88 -0.37 19.7 83 4 3 0 3 0 0 0  
2 1.39 1.40 26.1 -0.66 -0.04 7.5 86 2 1 4 4 4 0 0  
3 2.44 2.45 27.4 -1.04 -0.64 15.7 86 3 4 1 3 0 1 0  
4 1.51 2.27 27.8 -2.67 -0.72 26.6 83 4 4 4 0 0 0 1  
5 1.47 1.75 35.2 -0.97 -0.24 10.5 88 5 1 7 2 3 1 0  
6 1.40 1.40 39.9 -1.06 -0.18 8.4 87 3 1 6 4 4 1 0  
7 1.31 1.52 40.9 0.63 0.24 8.5 73 1 2 3 8 5 0 0  YN9 401 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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