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PDBsum entry 8id2
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Tunnel analysis for: 8id2 calculated with  MOLE 2.0
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PDB id
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8id2
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
1.68 |
15.2 |
-1.51 |
-0.59 |
22.1 |
81 |
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3 |
1 |
1 |
2 |
0 |
0 |
0 |
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G 10 C U 11 C
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2 |
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1.24 |
1.62 |
28.4 |
-1.51 |
-0.57 |
20.4 |
74 |
5 |
1 |
0 |
2 |
0 |
1 |
0 |
U 7 C G 8 C C 9 C G 10 C U 11 C
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3 |
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1.23 |
1.66 |
35.3 |
-1.89 |
-0.54 |
26.6 |
73 |
6 |
2 |
0 |
3 |
0 |
0 |
0 |
A 5 C C 6 C G 8 C C 9 C G 10 C U 11 C
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4 |
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1.23 |
1.65 |
41.4 |
-1.90 |
-0.61 |
25.3 |
76 |
5 |
2 |
0 |
2 |
0 |
0 |
0 |
G 4 C A 5 C C 6 C G 8 C C 9 C G 10 C U 11 C C 15 C
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5 |
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1.29 |
1.29 |
25.5 |
-1.79 |
-0.63 |
20.8 |
71 |
5 |
0 |
0 |
0 |
0 |
1 |
0 |
G 8 D C 9 D G 10 D U 11 D
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6 |
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1.29 |
1.29 |
26.0 |
-1.43 |
-0.54 |
18.3 |
68 |
5 |
0 |
0 |
0 |
1 |
1 |
0 |
G 8 D C 9 D G 10 D U 11 D C 13 D
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7 |
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1.27 |
1.27 |
27.6 |
-1.94 |
-0.57 |
25.4 |
71 |
6 |
1 |
0 |
1 |
0 |
0 |
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A 5 D C 6 D C 9 D G 10 D U 11 D
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8 |
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1.27 |
1.27 |
28.1 |
-1.78 |
-0.52 |
24.3 |
69 |
6 |
1 |
0 |
1 |
1 |
0 |
0 |
A 5 D C 6 D C 9 D G 10 D U 11 D C 13 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program