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PDBsum entry 8i3c

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8i3c calculated with MOLE 2.0 PDB id
8i3c
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.36 1.77 41.1 -0.30 0.06 8.7 78 3 0 5 6 6 0 0  Y01 701 A Y01 701 B
2 1.36 1.79 43.3 -0.42 0.06 12.8 80 4 1 4 7 5 0 0  Y01 701 A Y01 701 B
3 1.37 1.78 49.5 0.51 0.30 10.4 83 4 1 5 7 5 0 0  Y01 701 A Y01 701 B
4 1.13 1.27 31.8 -1.15 -0.17 23.5 86 4 0 1 3 0 0 0  
5 1.68 2.74 52.3 -2.05 -0.62 21.9 87 7 2 4 3 0 1 0  
6 1.19 1.31 58.2 -1.48 -0.42 20.1 81 8 0 2 3 0 1 0  
7 1.12 1.26 26.9 -1.32 -0.32 21.2 91 4 1 2 4 0 0 0  
8 1.66 2.72 43.1 -1.94 -0.62 21.1 83 7 1 3 2 0 1 0  
9 1.19 1.34 43.9 -1.49 -0.46 19.1 82 7 0 2 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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