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PDBsum entry 8hya

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Pore analysis for: 8hya calculated with MOLE 2.0 PDB id
8hya
Pores calculated on whole structure Pores calculated excluding ligands

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19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.18 28.3 1.09 0.26 2.7 79 0 2 2 4 2 1 0  
2 1.76 1.82 71.6 -2.01 -0.55 24.4 83 8 9 7 1 2 0 0  
3 1.18 1.37 97.6 -1.15 -0.28 18.6 82 6 4 6 5 1 1 0  
4 1.21 1.51 125.1 -1.91 -0.55 27.6 80 11 18 8 11 1 0 0  
5 1.12 1.30 124.8 -1.34 -0.36 22.9 82 10 15 6 10 3 2 0  
6 1.22 2.04 125.5 0.22 0.30 13.0 79 8 4 4 9 5 2 1  
7 1.13 1.29 133.8 -1.59 -0.41 28.5 81 16 19 2 13 1 2 0  
8 1.21 2.06 140.0 -0.50 -0.24 13.9 81 11 9 9 17 3 7 1  
9 1.31 2.66 140.3 -1.95 -0.56 25.4 84 9 12 9 7 2 0 0  
10 1.20 2.02 153.9 -0.81 -0.19 17.4 81 9 11 7 8 3 4 1  
11 1.72 1.90 157.9 -2.93 -0.77 34.2 81 16 22 11 0 1 0 0  
12 1.50 1.87 154.3 -1.68 -0.29 24.7 79 13 10 7 6 6 1 0  
13 1.23 2.07 161.4 -0.22 -0.01 13.8 81 8 8 6 15 4 3 1  
14 1.17 2.08 164.6 -0.01 0.05 12.8 80 8 7 6 17 4 2 1  
15 1.34 1.41 168.7 -1.23 -0.29 21.1 83 14 12 8 9 5 3 1  
16 1.24 3.11 195.5 -0.96 -0.17 18.9 81 14 13 11 11 7 3 1  
17 1.43 1.30 197.9 -2.49 -0.65 35.5 82 18 19 7 10 0 0 0  
18 1.08 1.25 260.4 -1.77 -0.49 26.7 84 18 21 11 14 3 2 1  
19 1.03 1.15 261.1 -1.72 -0.48 26.1 84 18 21 11 14 3 2 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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