spacer
spacer

PDBsum entry 8hws

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8hws calculated with MOLE 2.0 PDB id
8hws
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 1.58 36.9 -1.69 -0.52 14.5 80 2 4 7 3 3 1 0  
2 2.10 2.24 29.7 -1.52 -0.70 16.8 80 2 4 2 1 0 3 0  
3 2.09 2.24 32.8 -1.75 -0.78 19.4 85 2 3 2 0 0 2 0  
4 1.83 1.91 37.9 -0.99 -0.38 15.6 82 3 4 3 4 2 2 0  
5 1.26 2.31 45.8 -0.92 -0.34 14.8 85 3 4 4 2 2 2 0  
6 1.55 2.50 27.9 -0.49 -0.30 7.5 82 0 1 1 3 1 3 0  
7 1.32 1.39 32.0 -0.62 -0.58 2.7 98 0 1 7 2 0 1 0  
8 1.55 2.51 51.8 -0.69 -0.29 9.5 80 2 2 1 5 2 4 0  
9 1.30 1.49 56.9 -0.56 -0.39 7.7 86 2 1 5 4 1 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer