spacer
spacer

PDBsum entry 8hv6

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 8hv6 calculated with MOLE 2.0 PDB id
8hv6
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 tunnel, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.54 15.2 1.06 0.31 7.2 83 1 1 1 5 0 0 1  N86 1102 A
2 1.24 1.54 17.6 1.28 0.17 3.5 82 0 1 2 6 0 0 1  N86 1102 A
3 1.23 1.53 21.0 0.36 0.09 11.6 87 2 1 3 5 0 0 1  N86 1102 A
4 1.23 1.52 26.4 1.49 0.29 4.0 74 2 0 1 7 0 0 1  N86 1102 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer