PDBsum entry 8huh

Pore analysis for: 8huh calculated with

MOLE 2.0

PDB id

8huh

Pores calculated on whole structure

Pores calculated excluding ligands

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15 pores, coloured by radius

16 pores, coloured by radius

16 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.28

1.47

25.1

-2.24

-0.63

17.2

79

4

2

4

0

0

4

0

2

1.53

2.29

30.7

-1.34

-0.47

15.9

84

3

2

3

3

0

1

0

3

1.14

1.14

40.6

-1.82

-0.61

15.7

85

5

2

6

3

0

2

0

4

1.18

1.31

40.5

-1.75

-0.46

20.5

82

3

3

4

1

1

0

1

ACP 401 F

5

1.51

1.64

80.7

-2.33

-0.55

29.2

85

11

8

4

4

0

3

0

6

1.20

2.57

94.7

-2.21

-0.50

28.3

84

13

8

5

7

0

4

0

7

2.48

2.67

32.9

-1.18

-0.33

14.1

80

1

6

3

4

1

2

0

8

1.93

3.80

32.9

-2.70

-0.75

28.4

85

3

6

4

0

0

1

0

9

2.01

2.02

36.2

-2.36

-0.84

24.2

88

3

6

6

0

0

0

0

10

1.94

3.75

40.5

-2.39

-0.63

25.4

80

4

7

3

0

1

2

0

11

2.01

2.01

41.5

-1.47

-0.45

17.4

83

3

6

5

2

1

1

0

12

1.60

2.18

52.2

-2.81

-0.46

39.1

81

9

8

0

3

1

1

0

13

1.89

1.88

103.4

-1.68

-0.61

18.9

82

5

6

5

3

2

3

0

14

1.27

3.33

103.7

-1.63

-0.25

17.8

80

8

3

5

5

4

2

0

MES 504 B

15

2.16

2.91

45.1

-0.85

-0.44

8.1

82

1

3

4

4

1

2

0

16

1.20

1.34

27.9

-0.24

-0.40

5.1

89

1

1

4

3

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.