 |
PDBsum entry 8hri
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8hri calculated with MOLE 2.0
|
PDB id
|
|
|
|
8hri
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
30 pores,
coloured by radius |
 |
30 pores,
coloured by radius
|
30 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.30 |
2.89 |
36.9 |
-0.27 |
-0.18 |
14.7 |
84 |
 |
3 |
6 |
3 |
9 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.87 |
2.04 |
38.6 |
-0.65 |
-0.21 |
9.9 |
87 |
2 |
2 |
5 |
5 |
1 |
1 |
0 |
|
 |
3 |
 |
1.26 |
1.49 |
47.9 |
-1.10 |
-0.31 |
21.6 |
86 |
3 |
7 |
1 |
7 |
0 |
2 |
0 |
|
 |
4 |
 |
2.34 |
3.13 |
56.5 |
-1.22 |
-0.30 |
18.6 |
85 |
5 |
6 |
8 |
11 |
1 |
0 |
0 |
|
 |
5 |
 |
1.44 |
1.44 |
71.5 |
-2.02 |
-0.53 |
22.0 |
81 |
8 |
7 |
5 |
4 |
3 |
2 |
0 |
|
 |
6 |
 |
2.07 |
2.44 |
77.3 |
-1.59 |
-0.59 |
11.7 |
87 |
3 |
4 |
11 |
4 |
0 |
1 |
2 |
|
 |
7 |
 |
2.10 |
2.40 |
91.3 |
-1.29 |
-0.39 |
15.3 |
83 |
7 |
7 |
9 |
5 |
2 |
2 |
2 |
|
 |
8 |
 |
1.71 |
2.03 |
112.0 |
-1.86 |
-0.54 |
23.1 |
83 |
13 |
11 |
7 |
7 |
3 |
5 |
0 |
|
 |
9 |
 |
1.28 |
1.50 |
113.2 |
-1.27 |
-0.37 |
18.1 |
86 |
11 |
7 |
8 |
9 |
4 |
4 |
0 |
|
 |
10 |
 |
2.69 |
3.91 |
117.1 |
-1.87 |
-0.60 |
21.8 |
87 |
10 |
10 |
12 |
4 |
2 |
3 |
1 |
|
 |
11 |
 |
1.30 |
2.97 |
130.0 |
-1.67 |
-0.51 |
10.2 |
80 |
5 |
4 |
13 |
5 |
3 |
4 |
2 |
|
 |
12 |
 |
2.77 |
3.93 |
128.9 |
-2.07 |
-0.66 |
21.2 |
89 |
14 |
9 |
19 |
3 |
2 |
1 |
1 |
|
 |
13 |
 |
1.18 |
1.38 |
139.8 |
-0.89 |
-0.23 |
17.3 |
85 |
11 |
8 |
8 |
14 |
4 |
2 |
0 |
|
 |
14 |
 |
2.09 |
3.56 |
141.0 |
-1.69 |
-0.45 |
17.8 |
84 |
11 |
6 |
13 |
5 |
5 |
2 |
3 |
|
 |
15 |
 |
1.19 |
1.21 |
138.3 |
-0.62 |
0.05 |
12.4 |
79 |
6 |
1 |
5 |
6 |
5 |
1 |
2 |
|
 |
16 |
 |
2.78 |
3.91 |
145.3 |
-1.81 |
-0.50 |
21.4 |
84 |
11 |
13 |
13 |
7 |
4 |
3 |
1 |
|
 |
17 |
 |
1.31 |
1.46 |
151.6 |
-1.43 |
-0.39 |
18.8 |
86 |
12 |
10 |
11 |
11 |
5 |
3 |
0 |
|
 |
18 |
 |
1.73 |
1.72 |
149.4 |
-1.75 |
-0.48 |
22.1 |
84 |
14 |
12 |
10 |
9 |
4 |
4 |
0 |
|
 |
19 |
 |
1.96 |
2.86 |
164.0 |
-1.64 |
-0.43 |
18.4 |
80 |
8 |
9 |
10 |
7 |
4 |
5 |
5 |
|
 |
20 |
 |
1.97 |
4.03 |
175.9 |
-1.79 |
-0.48 |
17.9 |
83 |
12 |
8 |
17 |
6 |
4 |
3 |
5 |
|
 |
21 |
 |
1.40 |
1.63 |
177.1 |
-1.92 |
-0.51 |
19.7 |
82 |
12 |
11 |
15 |
6 |
5 |
5 |
1 |
|
 |
22 |
 |
1.98 |
3.96 |
192.3 |
-1.55 |
-0.34 |
17.7 |
78 |
9 |
12 |
11 |
10 |
6 |
5 |
5 |
|
 |
23 |
 |
1.18 |
1.22 |
217.6 |
-1.24 |
-0.28 |
18.2 |
81 |
11 |
11 |
10 |
8 |
5 |
4 |
1 |
|
 |
24 |
 |
1.36 |
1.57 |
224.1 |
-1.69 |
-0.36 |
16.7 |
77 |
10 |
10 |
13 |
9 |
7 |
7 |
5 |
|
 |
25 |
 |
2.21 |
3.94 |
230.1 |
-1.62 |
-0.40 |
20.6 |
81 |
14 |
15 |
16 |
11 |
7 |
4 |
3 |
|
 |
26 |
 |
1.25 |
1.21 |
228.7 |
-0.95 |
-0.26 |
16.4 |
84 |
15 |
10 |
16 |
12 |
7 |
1 |
2 |
|
 |
27 |
 |
1.24 |
1.27 |
227.4 |
-0.91 |
-0.24 |
16.5 |
82 |
16 |
10 |
12 |
11 |
8 |
2 |
2 |
|
 |
28 |
 |
1.24 |
1.20 |
229.5 |
-1.49 |
-0.36 |
18.3 |
83 |
15 |
10 |
17 |
7 |
5 |
2 |
1 |
|
 |
29 |
 |
1.23 |
1.19 |
245.9 |
-1.28 |
-0.24 |
18.5 |
79 |
12 |
14 |
11 |
11 |
7 |
4 |
1 |
|
 |
30 |
 |
1.25 |
1.20 |
287.0 |
-1.30 |
-0.29 |
19.9 |
82 |
17 |
17 |
16 |
13 |
7 |
3 |
1 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |