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PDBsum entry 8hqo

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 8hqo calculated with MOLE 2.0 PDB id
8hqo
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 1.82 29.1 -1.51 -0.23 22.8 78 5 2 2 2 2 2 1  
2 2.40 2.54 31.3 -1.98 -0.54 19.0 84 3 4 2 3 1 1 0  
3 2.30 2.45 34.9 -2.17 -0.56 21.3 82 3 5 2 2 2 2 0  
4 2.30 2.46 38.8 -1.58 -0.49 17.5 79 3 5 2 2 0 1 0  
5 2.42 3.12 41.2 -1.52 -0.47 17.4 85 3 3 3 3 1 0 0  
6 2.41 2.41 44.7 -0.89 -0.59 18.3 75 0 5 2 4 0 2 0  
7 1.22 1.33 45.2 -1.22 -0.49 9.5 80 2 2 4 2 2 1 0  
8 1.28 2.65 52.6 -1.70 -0.39 23.0 74 8 7 2 2 5 1 0  
9 1.35 1.35 64.1 -1.77 -0.58 20.4 80 7 6 3 4 1 2 0  
10 1.83 4.03 70.2 -1.50 -0.35 22.1 86 9 5 8 5 2 0 0  
11 1.26 1.48 95.3 0.11 0.07 13.9 80 5 5 3 15 4 0 0  
12 1.65 2.09 121.4 -1.42 -0.45 18.8 88 3 7 7 8 2 1 0  
13 1.16 1.28 128.7 -1.41 -0.46 18.6 83 5 5 4 5 3 0 0  
14 1.30 1.48 150.8 -1.25 -0.21 17.7 84 11 3 12 9 2 2 2  
15 1.29 1.63 165.5 -2.37 -0.62 21.1 84 13 11 12 4 2 1 0  
16 1.29 1.61 175.3 -1.55 -0.49 18.6 84 16 9 15 7 4 4 0  
17 1.63 1.83 187.9 -1.44 -0.47 18.4 83 9 13 8 8 2 2 0  
18 1.39 2.59 212.0 -1.84 -0.53 17.6 82 17 10 19 5 7 6 0  
19 1.58 1.59 228.6 -1.41 -0.48 15.8 89 6 13 16 9 4 5 0  
20 1.42 1.79 243.0 -1.80 -0.54 22.0 86 17 19 19 14 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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