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PDBsum entry 8hq6

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Pore analysis for: 8hq6 calculated with MOLE 2.0 PDB id
8hq6
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.45 3.46 38.2 -3.02 -0.75 28.2 80 7 5 3 0 0 1 0  
2 3.63 4.12 38.9 -3.26 -0.71 40.6 76 7 7 1 0 0 1 0  
3 2.15 4.36 49.2 -2.19 -0.53 22.4 82 8 4 5 2 1 1 0  NO3 303 A GTP 306 A
4 2.28 4.66 49.5 -2.89 -0.63 29.2 81 5 8 4 1 1 1 0  DMS 1118 C
5 1.72 1.72 50.6 -2.76 -0.68 31.8 84 9 6 5 3 0 2 0  NO3 303 A
6 3.32 3.36 56.2 -3.12 -0.75 35.9 78 10 8 3 0 0 2 0  
7 2.27 4.63 63.4 -3.04 -0.60 39.0 79 8 11 2 1 1 1 0  DMS 1118 C
8 2.15 4.36 64.8 -2.18 -0.52 24.9 82 9 8 6 3 1 1 0  NO3 303 A GTP 306 A
9 1.77 1.76 103.1 -2.39 -0.61 26.2 81 16 13 11 5 2 3 0  NO3 303 A GTP 306 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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