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PDBsum entry 8hq4

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Pore analysis for: 8hq4 calculated with MOLE 2.0 PDB id
8hq4
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.93 2.37 26.7 -2.86 -0.60 39.0 80 5 2 1 2 0 0 0  
2 2.98 3.07 34.8 -2.22 -0.44 24.1 83 4 4 4 1 1 1 0  GOL 302 A GTP 303 A
3 1.96 3.86 35.3 -2.63 -0.50 33.8 81 8 2 3 1 1 0 0  
4 1.76 1.90 37.0 -2.54 -0.71 28.0 83 8 5 4 2 0 1 0  
5 1.53 2.57 40.9 -2.25 -0.57 27.9 81 7 7 2 3 2 0 0  GOL 302 A
6 1.55 2.66 47.3 -2.92 -0.34 33.7 79 10 6 3 2 3 0 0  
7 1.67 2.45 83.5 -1.98 -0.50 21.1 82 7 7 6 3 2 1 0  GTP 303 A
8 2.02 2.82 85.8 -0.97 -0.23 12.6 79 4 3 3 6 1 3 0  
9 1.47 2.80 92.3 -1.00 -0.43 13.6 85 6 3 6 7 0 2 0  
10 1.67 2.44 97.7 -1.78 -0.40 24.5 79 8 11 3 4 3 2 0  GOL 302 A GTP 303 A
11 1.68 2.42 113.5 -1.63 -0.39 22.2 83 10 7 3 5 1 3 0  GTP 303 A
12 1.68 2.46 135.8 -1.50 -0.35 23.9 80 11 12 2 6 2 4 0  GOL 302 A GTP 303 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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