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PDBsum entry 8hq3

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8hq3 calculated with MOLE 2.0 PDB id
8hq3
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 1.35 24.0 -0.04 -0.12 19.4 85 2 2 0 4 1 0 0  
2 1.10 2.31 24.5 1.11 0.51 14.3 70 2 1 0 5 2 0 0  
3 1.37 2.69 16.8 2.15 0.69 7.1 83 1 1 1 7 1 0 0  DMS 1114 C
4 1.36 2.58 19.3 1.71 0.66 9.7 79 1 1 1 7 2 0 0  DMS 1114 C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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