PDBsum entry 8hpg

Pore analysis for: 8hpg calculated with

MOLE 2.0

PDB id

8hpg

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

4.51

4.52

25.5

-0.72

-0.11

10.4

81

3

1

2

3

2

1

0

2

2.45

3.16

26.0

-1.12

-0.31

14.3

81

3

1

1

2

0

2

0

3

1.27

1.30

28.2

-0.94

-0.58

8.8

84

3

1

2

2

0

2

0

4

2.03

2.41

34.2

-0.53

-0.17

13.4

87

5

2

4

5

1

1

0

5

2.21

2.21

34.2

-1.66

-0.45

19.6

82

4

2

3

2

2

1

0

6

2.21

2.21

36.8

-1.62

-0.37

25.4

86

6

3

3

4

1

0

0

7

2.04

2.39

46.7

-0.53

-0.16

14.9

89

7

2

3

6

1

1

0

8

1.25

1.41

96.7

-0.47

-0.13

11.2

81

4

1

4

7

3

4

0

9

1.17

1.33

109.4

-0.80

-0.12

14.2

78

8

3

6

7

4

3

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.