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PDBsum entry 8hpc

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Pore analysis for: 8hpc calculated with MOLE 2.0 PDB id
8hpc
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.94 1.94 43.1 -1.22 -0.47 12.3 74 5 2 4 3 2 2 0  
2 1.94 1.94 57.1 -1.60 -0.51 17.6 74 9 7 3 1 3 3 0  
3 1.38 1.68 63.5 -0.24 -0.30 11.5 89 5 3 4 12 2 0 0  
4 1.30 1.44 76.7 -1.52 -0.20 16.5 75 11 1 5 4 2 9 2  M9L 401 E M9L 401 H
5 1.35 1.50 98.1 -1.07 -0.36 20.4 84 9 11 2 10 3 1 0  
6 1.78 2.33 99.9 -1.53 -0.28 14.0 75 9 3 6 4 3 9 1  M9L 401 A
7 1.35 1.61 102.6 -0.73 -0.37 15.7 85 8 7 3 12 1 1 0  
8 1.37 1.56 105.9 -0.99 -0.43 15.0 81 7 11 6 13 4 2 0  
9 1.78 2.33 107.3 -1.87 -0.27 21.2 77 14 6 3 3 3 8 1  M9L 401 A
10 1.40 1.62 108.2 -0.50 -0.15 12.3 81 9 6 5 12 3 7 1  M9L 401 A
11 1.35 1.34 123.2 -0.65 -0.20 11.4 81 12 4 10 8 6 8 2  M9L 401 A M9L 401 E
12 1.32 1.32 130.3 -0.67 -0.20 11.1 81 12 4 11 9 6 8 2  M9L 401 A M9L 401 H
13 1.74 2.49 135.4 -1.42 -0.29 17.2 75 12 7 6 5 2 8 1  M9L 401 A
14 1.36 1.35 152.2 -0.84 -0.26 11.9 80 15 7 11 6 6 8 2  M9L 401 B M9L 401 C
15 1.26 1.42 165.6 -0.81 -0.26 11.3 80 11 4 13 10 7 8 1  M9L 401 E
16 1.38 1.43 164.9 -1.02 -0.27 14.6 81 16 8 9 8 7 7 1  M9L 401 E
17 1.23 1.23 174.9 -1.01 -0.27 14.4 81 17 8 10 8 7 7 1  M9L 401 H
18 1.33 1.33 184.0 -0.44 -0.21 11.2 83 13 10 13 19 8 6 1  M9L 401 E
19 1.31 1.31 193.0 -0.83 -0.26 13.4 80 14 9 12 10 6 7 1  M9L 401 E
20 1.28 1.25 203.0 -0.77 -0.27 12.4 79 15 9 13 11 6 7 1  M9L 401 H
21 1.37 1.49 44.3 -0.28 -0.28 14.2 87 5 5 2 11 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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