PDBsum entry 8hpa Go to PDB code:  Pore analysis for: 8hpa calculated with MOLE 2.0 PDB id 8hpa Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.65 2.30 39.2 -0.97 0.14 10.9 83 3 1 3 4 3 0 0  DA -12 E DT -11 E 2 2.53 2.73 45.2 -1.26 -0.36 11.9 87 2 3 5 4 1 0 0  DA -12 E DT -11 E 3 2.61 4.22 49.7 -1.72 -0.27 27.4 75 6 6 2 1 5 0 1  DA -12 E DT -11 E 4 2.71 3.11 53.5 -1.94 -0.33 27.1 83 5 6 4 3 3 0 0  DC 1 D 5 1.13 2.28 62.5 -1.16 -0.04 23.4 80 7 9 3 3 3 0 0   6 1.32 1.39 67.8 -1.50 -0.68 15.9 84 3 5 6 5 1 0 0   7 2.12 2.16 100.8 -1.87 -0.46 20.4 79 9 3 5 3 4 0 1  DC -3 D DT -1 D DA 0 D DC 1 D DA -12 E DT - 11 E DG -10 E DG -9 E DT -8 E DA -7 E DG -6 E 8 1.25 1.22 100.3 -1.24 -0.18 21.7 82 5 6 7 9 4 1 0   9 1.19 1.21 111.8 -1.59 -0.24 22.7 82 7 7 8 9 3 1 0  DC 1 D 10 2.12 2.13 114.5 -1.44 -0.36 17.8 75 9 4 5 3 7 0 1  DC -3 D DT -1 D DA 0 D DC 1 D DA -12 E DT - 11 E DG -10 E DG -9 E DT -8 E DA -7 E DG -6 E 11 2.25 2.37 127.1 -1.41 -0.45 16.3 81 10 7 8 5 4 0 1  DC -3 D DT -1 D DA 0 D DC 1 D DG -10 E DG - 9 E DT -8 E DA -7 E DG -6 E 12 1.20 1.22 136.4 -1.63 -0.27 24.5 83 10 10 10 9 3 1 0  DC 1 D 13 1.12 1.52 31.7 0.84 0.51 5.6 87 1 1 3 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.