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PDBsum entry 8hnt

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 8hnt calculated with MOLE 2.0 PDB id
8hnt
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 3.55 46.2 0.41 0.27 11.7 79 4 2 4 6 5 0 0  U 3 B
2 1.21 3.65 54.0 -0.05 0.17 12.6 81 5 3 6 7 6 0 0  
3 1.06 1.06 28.6 1.68 0.41 7.0 79 2 1 0 9 0 0 0  C 34 B C 35 B U 56 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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