 |
PDBsum entry 8hnk
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8hnk calculated with  MOLE 2.0
|
PDB id
|
|
|
|
8hnk
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
9 pores,
coloured by radius |
|
9 pores,
coloured by radius
|
9 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.37 |
4.05 |
40.5 |
-1.14 |
-0.43 |
15.7 |
87 |
|
6 |
2 |
5 |
2 |
0 |
2 |
2 |
|
|
 |
|
2 |
 |
1.23 |
1.39 |
49.9 |
-0.52 |
-0.26 |
17.1 |
80 |
3 |
5 |
2 |
8 |
2 |
0 |
0 |
|
|
3 |
 |
1.46 |
1.48 |
80.1 |
-1.63 |
-0.50 |
17.6 |
86 |
9 |
6 |
8 |
4 |
3 |
1 |
0 |
|
|
4 |
 |
1.28 |
1.25 |
92.2 |
-0.65 |
-0.32 |
14.6 |
86 |
7 |
4 |
6 |
12 |
2 |
1 |
0 |
|
|
5 |
 |
1.68 |
1.91 |
101.5 |
-1.48 |
-0.49 |
20.1 |
86 |
9 |
7 |
7 |
8 |
3 |
1 |
0 |
|
|
6 |
 |
1.46 |
1.60 |
155.4 |
-1.58 |
-0.47 |
19.6 |
85 |
10 |
11 |
7 |
8 |
4 |
2 |
0 |
|
|
7 |
 |
1.44 |
1.99 |
33.2 |
-0.22 |
-0.12 |
13.7 |
74 |
2 |
2 |
4 |
5 |
3 |
1 |
0 |
|
|
8 |
 |
1.50 |
1.89 |
70.3 |
-1.68 |
-0.39 |
23.2 |
76 |
8 |
4 |
5 |
4 |
0 |
2 |
1 |
|
 |
9 |
 |
1.45 |
1.99 |
75.7 |
-1.64 |
-0.30 |
25.9 |
73 |
9 |
4 |
3 |
5 |
3 |
1 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program