PDBsum entry 8hmh Go to PDB code:  Tunnel analysis for: 8hmh calculated with MOLE 2.0 PDB id 8hmh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 3.40 25.4 0.81 0.46 10.4 81 1 4 1 6 3 0 0  MSE 299 B 2 0.99 2.34 27.0 1.49 0.67 4.7 78 1 1 2 6 5 0 0  MSE 300 B 3 1.40 3.43 28.5 1.08 0.44 6.5 79 0 3 1 6 4 0 0  MSE 299 B MSE 300 B 4 1.29 1.94 19.1 -0.26 0.12 10.5 68 1 3 1 2 3 0 0  MSE 299 A MSE 300 A 5 1.05 2.38 25.2 -0.31 0.15 8.9 69 1 1 2 2 3 0 0  MSE 300 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.