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PDBsum entry 8hmc
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Pore analysis for: 8hmc calculated with MOLE 2.0
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PDB id
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8hmc
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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30 pores,
coloured by radius |
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28 pores,
coloured by radius
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28 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.38 |
2.04 |
27.2 |
0.68 |
0.39 |
11.8 |
78 |
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2 |
2 |
1 |
5 |
2 |
0 |
0 |
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2 |
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1.24 |
3.45 |
49.3 |
-2.32 |
-0.17 |
33.0 |
75 |
5 |
4 |
2 |
3 |
1 |
0 |
0 |
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3 |
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2.57 |
3.38 |
51.8 |
-1.79 |
-0.41 |
24.0 |
75 |
6 |
4 |
2 |
1 |
2 |
1 |
1 |
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4 |
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2.16 |
2.18 |
59.1 |
-1.15 |
-0.15 |
21.1 |
79 |
7 |
4 |
4 |
5 |
2 |
0 |
0 |
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5 |
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1.20 |
1.50 |
64.5 |
-1.75 |
-0.51 |
16.2 |
87 |
5 |
5 |
9 |
4 |
2 |
1 |
1 |
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6 |
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1.55 |
2.38 |
75.8 |
-2.10 |
-0.67 |
18.1 |
91 |
8 |
8 |
13 |
3 |
0 |
1 |
0 |
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7 |
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2.25 |
2.37 |
81.3 |
-1.61 |
-0.48 |
22.2 |
77 |
9 |
7 |
4 |
5 |
0 |
1 |
1 |
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8 |
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1.21 |
1.57 |
107.3 |
-1.87 |
-0.41 |
18.3 |
81 |
10 |
11 |
14 |
7 |
4 |
4 |
1 |
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9 |
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1.55 |
1.60 |
116.6 |
-2.07 |
-0.55 |
18.7 |
85 |
13 |
11 |
15 |
8 |
2 |
3 |
0 |
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10 |
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2.19 |
2.78 |
118.3 |
-1.98 |
-0.44 |
23.9 |
79 |
12 |
13 |
9 |
11 |
3 |
4 |
0 |
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11 |
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1.18 |
1.55 |
125.1 |
-1.87 |
-0.49 |
19.9 |
83 |
12 |
12 |
14 |
7 |
3 |
3 |
1 |
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12 |
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1.20 |
1.56 |
128.2 |
-1.47 |
-0.30 |
20.9 |
81 |
8 |
8 |
9 |
11 |
3 |
1 |
1 |
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13 |
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1.98 |
2.08 |
129.8 |
-2.05 |
-0.39 |
22.3 |
76 |
15 |
10 |
9 |
5 |
4 |
0 |
1 |
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14 |
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2.01 |
2.28 |
136.3 |
-1.76 |
-0.36 |
21.3 |
80 |
16 |
11 |
10 |
6 |
5 |
1 |
0 |
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15 |
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1.50 |
2.40 |
135.9 |
-1.97 |
-0.57 |
20.0 |
87 |
14 |
13 |
16 |
9 |
1 |
3 |
0 |
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16 |
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1.31 |
2.55 |
139.0 |
-1.64 |
-0.43 |
20.7 |
86 |
10 |
9 |
11 |
13 |
1 |
1 |
0 |
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17 |
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1.50 |
1.49 |
152.8 |
-2.21 |
-0.52 |
24.4 |
80 |
14 |
11 |
11 |
5 |
5 |
0 |
0 |
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18 |
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1.98 |
2.10 |
161.3 |
-2.05 |
-0.32 |
25.2 |
75 |
13 |
13 |
8 |
7 |
4 |
1 |
0 |
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19 |
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1.28 |
2.58 |
165.1 |
-1.73 |
-0.39 |
22.1 |
81 |
13 |
12 |
12 |
15 |
3 |
3 |
0 |
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20 |
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2.17 |
2.82 |
165.9 |
-2.13 |
-0.49 |
23.0 |
80 |
11 |
17 |
14 |
13 |
3 |
5 |
0 |
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21 |
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1.30 |
2.57 |
178.1 |
-1.13 |
-0.21 |
20.8 |
82 |
12 |
8 |
9 |
18 |
3 |
3 |
0 |
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22 |
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1.28 |
1.27 |
179.5 |
-1.49 |
-0.26 |
21.7 |
79 |
13 |
14 |
12 |
13 |
3 |
2 |
1 |
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23 |
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1.38 |
2.23 |
188.8 |
-1.22 |
-0.27 |
18.6 |
81 |
16 |
7 |
14 |
16 |
4 |
5 |
2 |
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24 |
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1.59 |
2.37 |
190.3 |
-1.59 |
-0.35 |
21.8 |
82 |
15 |
15 |
14 |
15 |
1 |
2 |
0 |
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25 |
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1.80 |
1.94 |
217.6 |
-1.85 |
-0.33 |
21.1 |
82 |
18 |
7 |
12 |
9 |
4 |
3 |
1 |
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26 |
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1.25 |
1.17 |
218.4 |
-2.26 |
-0.60 |
21.1 |
82 |
13 |
16 |
22 |
5 |
5 |
5 |
1 |
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27 |
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1.50 |
2.17 |
218.5 |
-1.67 |
-0.24 |
23.4 |
85 |
17 |
10 |
10 |
13 |
3 |
1 |
0 |
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28 |
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1.82 |
1.94 |
235.2 |
-1.65 |
-0.29 |
21.9 |
84 |
15 |
10 |
12 |
14 |
3 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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