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PDBsum entry 8hk6

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Top Page protein metals Protein-protein interface(s) pores links
Pore analysis for: 8hk6 calculated with MOLE 2.0 PDB id
8hk6
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.00 3.22 27.8 0.92 0.48 14.8 71 1 1 0 3 2 1 0  
2 1.51 1.54 31.4 -2.19 -0.45 24.0 81 5 3 2 2 2 1 0  
3 2.14 2.76 33.9 -1.75 -0.39 11.6 87 3 1 6 3 1 0 0  
4 2.61 3.74 56.0 1.72 0.70 6.6 70 2 2 0 11 5 2 0  
5 2.61 3.74 56.6 0.99 0.61 12.5 66 2 3 0 9 6 2 0  
6 2.68 4.46 60.2 1.72 0.72 5.9 66 1 2 0 13 6 2 1  
7 2.08 2.56 63.8 -2.05 -0.35 16.1 83 6 1 9 2 1 1 0  
8 1.15 1.45 68.6 -2.06 -0.57 25.7 86 9 8 5 4 2 1 0  
9 1.42 1.50 76.3 -2.46 -0.66 33.5 88 7 11 5 3 1 0 0  
10 1.31 1.50 76.3 -2.48 -0.72 31.1 88 7 10 6 3 0 1 0  
11 1.42 1.48 85.5 -2.13 -0.72 28.3 89 5 12 7 5 0 0 0  
12 1.42 1.48 88.6 -1.79 -0.60 25.1 89 5 13 7 6 0 0 0  
13 2.82 4.43 100.9 -0.89 -0.04 21.8 72 7 8 3 10 6 2 0  
14 1.29 1.47 111.2 -2.29 -0.65 28.9 88 10 14 8 4 0 1 0  
15 1.37 2.02 147.5 -2.00 -0.60 24.5 86 11 16 11 11 3 2 0  
16 1.45 1.45 157.9 -2.06 -0.53 25.7 85 13 16 14 11 2 0 0  
17 1.45 1.49 165.4 -2.12 -0.57 26.4 87 11 19 11 10 1 0 0  
18 1.24 1.25 191.1 -2.13 -0.59 25.2 86 14 18 15 10 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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