spacer
spacer

PDBsum entry 8hk0

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8hk0 calculated with MOLE 2.0 PDB id
8hk0
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 1.69 41.2 0.60 0.13 3.2 83 0 2 6 9 3 0 0  FAD 401 A
2 1.94 1.96 56.8 -0.28 -0.16 11.1 82 2 3 5 9 3 1 0  FAD 401 A
3 1.24 1.29 154.1 -0.66 -0.27 13.2 82 6 6 6 13 2 7 1  FAD 401 B
4 1.21 1.22 179.5 -1.29 -0.42 19.0 82 15 11 9 14 4 6 1  FAD 401 A
5 1.21 1.22 192.5 -1.03 -0.41 16.0 83 14 11 6 10 2 6 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer