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PDBsum entry 8hgo

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8hgo calculated with MOLE 2.0 PDB id
8hgo
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.13 2.32 27.9 -0.50 0.08 15.2 77 4 2 0 4 2 0 0  
2 2.23 2.38 30.5 -2.50 -0.68 34.3 82 6 5 1 2 0 0 0  
3 1.14 2.69 57.4 -1.22 -0.15 23.8 78 5 5 2 5 3 1 0  
4 1.32 1.49 59.3 -0.09 0.15 9.2 80 4 2 2 7 3 3 0  
5 2.34 2.83 70.7 -0.45 -0.19 14.9 82 6 4 1 7 1 2 0  
6 2.23 2.40 72.2 -1.10 -0.13 17.1 80 6 5 5 6 3 2 0  
7 1.18 1.32 73.6 -1.12 -0.34 16.1 73 4 6 1 3 2 1 3  NAG 2 D BMA 3 D MAN 4 D
8 1.84 2.01 121.7 -0.72 -0.06 14.6 81 10 7 5 12 6 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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