PDBsum entry 8hgf

Pore analysis for: 8hgf calculated with

MOLE 2.0

PDB id

8hgf

Pores calculated on whole structure

Pores calculated excluding ligands

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13 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.26

1.43

33.8

-1.18

-0.21

18.8

74

6

0

0

3

2

2

0

2

1.50

1.51

34.1

-1.48

-0.40

20.2

71

3

2

0

3

2

3

0

3

1.50

1.50

41.5

-1.26

-0.42

16.6

73

5

0

0

3

2

2

0

4

1.53

2.75

59.2

-0.50

-0.19

12.1

83

6

1

4

8

1

1

0

5

1.19

1.32

63.2

-1.50

-0.35

18.8

72

7

2

1

3

3

5

0

6

3.47

3.61

73.1

-0.95

-0.39

15.0

88

4

5

5

8

1

0

0

7

1.33

1.44

81.5

-1.14

-0.26

15.3

82

6

5

4

10

2

5

1

8

1.52

2.76

114.5

-0.99

-0.39

12.9

84

8

4

7

9

2

1

1

9

1.19

1.89

160.8

-1.28

-0.17

22.2

83

15

7

6

16

4

0

0

10

1.47

1.55

176.8

-1.52

-0.34

17.8

79

13

8

8

6

3

7

1

11

1.44

1.74

203.3

-1.16

-0.31

16.8

81

15

7

9

11

4

6

1

12

1.61

1.61

31.5

-1.53

-0.38

25.9

84

5

4

2

2

1

0

0

13

1.60

1.95

38.6

-1.98

-0.46

26.0

79

6

4

2

0

1

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.