 |
PDBsum entry 8hf6
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 8hf6 calculated with MOLE 2.0
|
PDB id
|
|
|
|
8hf6
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
26 pores,
coloured by radius |
 |
27 pores,
coloured by radius
|
27 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.45 |
3.17 |
28.3 |
2.93 |
1.05 |
0.6 |
83 |
 |
0 |
0 |
2 |
18 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.17 |
3.50 |
32.9 |
0.63 |
0.61 |
13.0 |
86 |
3 |
2 |
2 |
7 |
1 |
0 |
0 |
|
 |
3 |
 |
1.40 |
2.69 |
34.9 |
0.40 |
0.16 |
12.3 |
78 |
4 |
1 |
1 |
11 |
1 |
0 |
0 |
|
 |
4 |
 |
1.19 |
3.50 |
38.9 |
0.37 |
0.22 |
11.9 |
85 |
2 |
2 |
2 |
11 |
3 |
0 |
0 |
ATP 801 B
|
 |
5 |
 |
2.01 |
2.18 |
43.9 |
-0.77 |
-0.38 |
11.1 |
86 |
5 |
2 |
4 |
6 |
2 |
0 |
0 |
ATP 801 B
|
 |
6 |
 |
1.17 |
1.36 |
46.7 |
-1.28 |
-0.38 |
13.4 |
94 |
3 |
4 |
6 |
4 |
2 |
0 |
0 |
|
 |
7 |
 |
1.16 |
1.35 |
47.1 |
-0.06 |
0.02 |
9.2 |
87 |
4 |
3 |
4 |
8 |
2 |
0 |
0 |
|
 |
8 |
 |
1.31 |
1.34 |
47.0 |
1.34 |
0.46 |
4.0 |
85 |
1 |
0 |
3 |
19 |
1 |
0 |
0 |
|
 |
9 |
 |
1.33 |
1.60 |
53.3 |
-0.72 |
-0.35 |
13.6 |
88 |
4 |
3 |
5 |
7 |
1 |
0 |
0 |
|
 |
10 |
 |
1.16 |
1.34 |
56.3 |
-1.28 |
-0.21 |
19.1 |
87 |
6 |
4 |
6 |
5 |
2 |
0 |
0 |
|
 |
11 |
 |
1.18 |
1.26 |
60.2 |
1.46 |
0.50 |
4.8 |
78 |
3 |
1 |
2 |
17 |
1 |
2 |
0 |
|
 |
12 |
 |
1.32 |
1.61 |
63.4 |
-1.54 |
-0.46 |
21.0 |
89 |
6 |
6 |
8 |
5 |
2 |
0 |
0 |
|
 |
13 |
 |
1.45 |
1.62 |
82.4 |
-0.49 |
-0.03 |
12.3 |
88 |
7 |
3 |
11 |
18 |
0 |
0 |
0 |
|
 |
14 |
 |
1.66 |
2.89 |
82.8 |
-2.29 |
-0.66 |
22.1 |
87 |
10 |
5 |
11 |
3 |
1 |
0 |
0 |
|
 |
15 |
 |
1.19 |
1.37 |
84.8 |
-0.71 |
-0.01 |
11.9 |
89 |
9 |
4 |
11 |
15 |
2 |
0 |
0 |
|
 |
16 |
 |
1.60 |
3.35 |
88.3 |
-1.57 |
-0.53 |
14.1 |
82 |
4 |
7 |
9 |
6 |
5 |
0 |
0 |
ATP 801 B
|
 |
17 |
 |
1.34 |
1.60 |
91.9 |
-0.97 |
-0.19 |
14.1 |
90 |
9 |
6 |
13 |
15 |
2 |
0 |
0 |
|
 |
18 |
 |
1.27 |
1.49 |
96.5 |
-0.74 |
-0.30 |
14.5 |
85 |
6 |
5 |
9 |
8 |
2 |
0 |
0 |
|
 |
19 |
 |
1.65 |
2.67 |
97.0 |
-2.03 |
-0.65 |
16.4 |
84 |
8 |
7 |
12 |
3 |
3 |
0 |
0 |
ATP 801 B
|
 |
20 |
 |
1.19 |
1.37 |
98.8 |
-1.13 |
-0.26 |
13.2 |
88 |
6 |
6 |
11 |
5 |
4 |
0 |
0 |
|
 |
21 |
 |
1.21 |
1.45 |
114.7 |
-1.13 |
-0.34 |
18.9 |
85 |
8 |
8 |
11 |
10 |
4 |
0 |
0 |
|
 |
22 |
 |
1.27 |
1.47 |
131.7 |
-1.06 |
-0.21 |
14.4 |
87 |
11 |
8 |
16 |
16 |
4 |
0 |
0 |
|
 |
23 |
 |
1.24 |
2.84 |
185.4 |
-0.72 |
-0.15 |
16.6 |
83 |
12 |
10 |
9 |
18 |
5 |
2 |
0 |
ATP 801 A
|
 |
24 |
 |
1.31 |
2.89 |
189.1 |
-0.43 |
-0.09 |
16.1 |
80 |
9 |
11 |
6 |
16 |
3 |
2 |
0 |
|
 |
25 |
 |
1.25 |
2.83 |
196.0 |
-0.31 |
-0.07 |
13.3 |
84 |
9 |
10 |
12 |
20 |
6 |
1 |
0 |
|
 |
26 |
 |
1.27 |
2.83 |
192.3 |
-0.35 |
-0.17 |
11.0 |
79 |
8 |
14 |
8 |
21 |
11 |
2 |
0 |
ATP 801 A ATP 801 B
|
 |
27 |
 |
1.24 |
2.84 |
266.9 |
0.66 |
0.37 |
12.6 |
81 |
8 |
8 |
7 |
38 |
5 |
2 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |