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PDBsum entry 8hf6

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Pore analysis for: 8hf6 calculated with MOLE 2.0 PDB id
8hf6
Pores calculated on whole structure Pores calculated excluding ligands

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26 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.45 3.17 28.3 2.93 1.05 0.6 83 0 0 2 18 0 0 0  
2 1.17 3.50 32.9 0.63 0.61 13.0 86 3 2 2 7 1 0 0  
3 1.40 2.69 34.9 0.40 0.16 12.3 78 4 1 1 11 1 0 0  
4 1.19 3.50 38.9 0.37 0.22 11.9 85 2 2 2 11 3 0 0  ATP 801 B
5 2.01 2.18 43.9 -0.77 -0.38 11.1 86 5 2 4 6 2 0 0  ATP 801 B
6 1.17 1.36 46.7 -1.28 -0.38 13.4 94 3 4 6 4 2 0 0  
7 1.16 1.35 47.1 -0.06 0.02 9.2 87 4 3 4 8 2 0 0  
8 1.31 1.34 47.0 1.34 0.46 4.0 85 1 0 3 19 1 0 0  
9 1.33 1.60 53.3 -0.72 -0.35 13.6 88 4 3 5 7 1 0 0  
10 1.16 1.34 56.3 -1.28 -0.21 19.1 87 6 4 6 5 2 0 0  
11 1.18 1.26 60.2 1.46 0.50 4.8 78 3 1 2 17 1 2 0  
12 1.32 1.61 63.4 -1.54 -0.46 21.0 89 6 6 8 5 2 0 0  
13 1.45 1.62 82.4 -0.49 -0.03 12.3 88 7 3 11 18 0 0 0  
14 1.66 2.89 82.8 -2.29 -0.66 22.1 87 10 5 11 3 1 0 0  
15 1.19 1.37 84.8 -0.71 -0.01 11.9 89 9 4 11 15 2 0 0  
16 1.60 3.35 88.3 -1.57 -0.53 14.1 82 4 7 9 6 5 0 0  ATP 801 B
17 1.34 1.60 91.9 -0.97 -0.19 14.1 90 9 6 13 15 2 0 0  
18 1.27 1.49 96.5 -0.74 -0.30 14.5 85 6 5 9 8 2 0 0  
19 1.65 2.67 97.0 -2.03 -0.65 16.4 84 8 7 12 3 3 0 0  ATP 801 B
20 1.19 1.37 98.8 -1.13 -0.26 13.2 88 6 6 11 5 4 0 0  
21 1.21 1.45 114.7 -1.13 -0.34 18.9 85 8 8 11 10 4 0 0  
22 1.27 1.47 131.7 -1.06 -0.21 14.4 87 11 8 16 16 4 0 0  
23 1.24 2.84 185.4 -0.72 -0.15 16.6 83 12 10 9 18 5 2 0  ATP 801 A
24 1.31 2.89 189.1 -0.43 -0.09 16.1 80 9 11 6 16 3 2 0  
25 1.25 2.83 196.0 -0.31 -0.07 13.3 84 9 10 12 20 6 1 0  
26 1.27 2.83 192.3 -0.35 -0.17 11.0 79 8 14 8 21 11 2 0  ATP 801 A ATP 801 B
27 1.24 2.84 266.9 0.66 0.37 12.6 81 8 8 7 38 5 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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