PDBsum entry 8hdp Go to PDB code:  Pore analysis for: 8hdp calculated with MOLE 2.0 PDB id 8hdp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.95 2.30 30.9 -1.15 -0.09 17.2 76 3 0 1 3 1 1 0   2 1.55 1.83 31.4 -2.47 -0.29 24.9 79 5 2 3 1 4 0 0   3 1.57 1.76 37.7 -1.03 -0.28 22.4 73 4 3 2 3 1 1 0   4 2.63 2.84 38.3 -2.05 -0.43 21.3 83 7 3 5 1 3 0 0   5 1.34 1.51 47.4 -2.44 -0.34 30.4 82 6 3 2 3 2 0 0   6 1.34 1.53 63.4 -2.23 -0.26 26.9 81 9 3 3 3 4 0 0   7 1.38 1.55 70.3 -1.93 -0.37 22.9 84 11 4 5 3 3 0 0   8 1.37 1.38 29.3 -0.87 -0.16 20.1 79 2 3 5 5 0 0 0   9 1.37 1.38 31.5 -0.57 -0.14 14.0 77 3 2 2 7 0 0 1   10 1.75 1.81 32.6 -1.71 -0.46 19.1 79 3 2 4 3 0 0 1   11 1.38 1.84 33.8 -1.36 -0.19 23.4 83 4 2 3 5 0 0 0   12 1.76 1.76 35.1 -1.40 -0.61 10.6 89 2 0 4 5 0 0 1   13 1.39 2.06 47.6 -1.55 -0.33 20.9 82 6 2 3 6 0 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.