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PDBsum entry 8hcj

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8hcj calculated with MOLE 2.0 PDB id
8hcj
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.70 1.90 16.0 0.00 1.01 8.4 67 1 1 1 2 3 1 0  
2 1.30 1.32 17.3 -0.86 -0.66 4.3 99 0 1 3 2 0 0 0  
3 1.37 1.37 15.4 -1.48 -0.63 17.2 61 1 2 0 0 1 1 0  
4 1.36 1.43 17.0 -0.36 0.07 7.6 84 1 0 3 3 2 0 0  
5 1.38 1.52 15.9 -1.13 -0.16 14.1 71 2 1 0 1 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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