PDBsum entry 8hcd Go to PDB code:  Tunnel analysis for: 8hcd calculated with MOLE 2.0 PDB id 8hcd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.40 17.5 -0.02 -0.02 15.6 80 2 2 2 4 1 0 0  DCM 302 B MG 303 B 2 1.26 1.40 18.5 -0.37 -0.01 19.0 80 2 2 2 4 1 0 0  DCM 301 D MG 303 D 3 1.28 1.28 16.1 -0.77 -0.07 21.9 80 2 2 2 4 1 0 0  DGP 301 C MG 303 C 4 1.28 1.28 25.7 -0.25 0.03 18.8 82 2 3 2 6 2 0 0  DGP 301 C MG 303 C 5 1.92 2.11 17.5 -2.44 -0.39 29.7 77 4 1 2 0 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.