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PDBsum entry 8hcb
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Pore analysis for: 8hcb calculated with  MOLE 2.0
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PDB id
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8hcb
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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26 pores,
coloured by radius |
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22 pores,
coloured by radius
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22 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.08 |
1.28 |
50.6 |
0.00 |
-0.12 |
9.6 |
86 |
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1 |
2 |
2 |
8 |
1 |
1 |
0 |
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2 |
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1.27 |
1.53 |
90.9 |
-0.84 |
-0.16 |
11.9 |
83 |
13 |
2 |
6 |
13 |
7 |
5 |
1 |
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3 |
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2.75 |
3.65 |
91.4 |
-1.47 |
-0.56 |
15.5 |
89 |
7 |
4 |
15 |
4 |
1 |
0 |
3 |
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4 |
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1.24 |
1.24 |
107.8 |
-0.71 |
-0.20 |
14.1 |
82 |
8 |
5 |
7 |
11 |
4 |
4 |
0 |
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5 |
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2.78 |
2.79 |
145.1 |
-0.89 |
-0.21 |
13.2 |
89 |
6 |
3 |
8 |
8 |
4 |
1 |
0 |
NAG 1303 B NAG 1307 C
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6 |
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2.86 |
3.06 |
149.2 |
-1.69 |
-0.42 |
22.5 |
84 |
7 |
14 |
10 |
9 |
4 |
2 |
0 |
NAG 1304 B
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7 |
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2.75 |
3.79 |
157.8 |
-2.14 |
-0.60 |
21.9 |
88 |
13 |
13 |
17 |
6 |
1 |
4 |
2 |
NAG 1304 B
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8 |
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1.31 |
1.53 |
167.1 |
-1.19 |
-0.19 |
16.4 |
81 |
19 |
8 |
14 |
16 |
8 |
5 |
0 |
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9 |
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1.97 |
2.42 |
196.9 |
-1.76 |
-0.49 |
21.6 |
86 |
19 |
12 |
17 |
9 |
4 |
2 |
2 |
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10 |
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2.02 |
2.33 |
196.8 |
-1.29 |
-0.29 |
20.7 |
82 |
15 |
13 |
11 |
13 |
6 |
3 |
0 |
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11 |
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1.97 |
2.41 |
201.6 |
-1.71 |
-0.44 |
20.3 |
85 |
16 |
12 |
13 |
9 |
5 |
4 |
0 |
NAG 1304 B
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12 |
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1.28 |
1.43 |
220.0 |
-0.46 |
-0.09 |
9.4 |
84 |
10 |
7 |
15 |
12 |
10 |
2 |
1 |
NAG 1303 A
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13 |
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1.32 |
1.66 |
245.2 |
-1.09 |
-0.21 |
13.9 |
84 |
11 |
13 |
21 |
15 |
11 |
2 |
1 |
NAG 1303 A NAG 1306 B
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14 |
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2.42 |
2.66 |
239.0 |
-1.81 |
-0.51 |
20.6 |
87 |
15 |
12 |
21 |
14 |
3 |
4 |
2 |
NAG 1303 B NAG 1304 B NAG 1307 C
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15 |
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2.40 |
2.65 |
245.1 |
-1.44 |
-0.36 |
20.2 |
83 |
9 |
15 |
15 |
16 |
6 |
3 |
0 |
NAG 1303 B NAG 1304 B NAG 1307 C
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16 |
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1.18 |
1.35 |
279.5 |
-1.39 |
-0.37 |
16.7 |
84 |
29 |
10 |
17 |
15 |
9 |
8 |
1 |
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17 |
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1.31 |
1.64 |
275.2 |
-1.09 |
-0.21 |
13.9 |
83 |
11 |
14 |
20 |
17 |
12 |
4 |
3 |
NAG 1303 A NAG 1304 B NAG 1306 B
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18 |
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1.15 |
1.60 |
292.7 |
-1.07 |
-0.39 |
13.7 |
83 |
9 |
9 |
18 |
13 |
6 |
5 |
1 |
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19 |
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1.18 |
1.25 |
335.4 |
-1.15 |
-0.32 |
12.8 |
86 |
25 |
8 |
23 |
28 |
11 |
7 |
1 |
NAG 1303 B NAG 1304 B NAG 1307 C
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20 |
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1.21 |
3.48 |
358.9 |
-1.06 |
-0.32 |
15.3 |
83 |
18 |
13 |
28 |
27 |
8 |
5 |
1 |
NAG 1 S
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21 |
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1.21 |
1.44 |
366.6 |
-0.68 |
-0.12 |
13.8 |
83 |
15 |
18 |
24 |
35 |
12 |
4 |
1 |
NAG 1303 A NAG 1306 B
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22 |
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1.22 |
1.15 |
381.1 |
-1.36 |
-0.38 |
17.3 |
84 |
32 |
14 |
28 |
25 |
12 |
6 |
1 |
NAG 1306 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program