PDBsum entry 8hc9 Go to PDB code:  Tunnel analysis for: 8hc9 calculated with MOLE 2.0 PDB id 8hc9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.43 15.0 -0.61 0.39 6.9 66 1 0 0 1 3 0 0   2 1.21 2.06 17.4 0.01 -0.33 2.0 85 0 0 2 3 2 2 0   3 1.36 1.39 18.1 -0.22 -0.36 11.7 69 1 2 1 1 1 0 2   4 1.22 1.61 19.4 0.58 0.00 2.4 81 1 0 4 3 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.