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PDBsum entry 8hbf

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Pore analysis for: 8hbf calculated with MOLE 2.0 PDB id
8hbf
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 1.38 26.3 -1.97 -0.45 24.4 80 5 1 1 1 2 0 0  
2 1.22 1.42 34.9 -0.35 -0.11 10.9 76 1 2 2 7 2 3 0  
3 1.15 1.76 38.0 -0.88 -0.38 11.8 86 1 2 2 4 2 0 0  
4 1.24 1.85 44.7 -1.29 -0.44 17.8 91 5 3 5 6 0 0 0  
5 1.91 1.91 45.3 -0.36 0.34 13.9 76 6 1 3 8 5 1 0  HEM 701 B GZO 702 B
6 1.23 1.23 50.0 -0.88 -0.36 17.9 86 6 4 4 9 1 0 0  
7 1.48 3.22 55.9 0.39 0.54 12.6 75 6 1 2 13 4 2 0  HEM 701 B GZO 702 B NO 703 B
8 1.24 1.23 57.5 -0.40 0.19 14.7 77 8 2 5 10 5 2 0  HEM 701 B GZO 702 B NO 703 B
9 1.13 1.13 70.6 0.25 -0.14 5.7 81 3 1 3 8 4 2 1  
10 1.18 1.20 76.4 -1.41 -0.36 20.1 83 6 3 3 4 1 3 0  G2P 1001 A MG 1002 A MG 1003 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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