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PDBsum entry 8hbf
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Pore analysis for: 8hbf calculated with MOLE 2.0
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PDB id
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8hbf
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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7 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
1.38 |
26.3 |
-1.97 |
-0.45 |
24.4 |
80 |
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5 |
1 |
1 |
1 |
2 |
0 |
0 |
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2 |
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1.22 |
1.42 |
34.9 |
-0.35 |
-0.11 |
10.9 |
76 |
1 |
2 |
2 |
7 |
2 |
3 |
0 |
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3 |
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1.15 |
1.76 |
38.0 |
-0.88 |
-0.38 |
11.8 |
86 |
1 |
2 |
2 |
4 |
2 |
0 |
0 |
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4 |
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1.24 |
1.85 |
44.7 |
-1.29 |
-0.44 |
17.8 |
91 |
5 |
3 |
5 |
6 |
0 |
0 |
0 |
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5 |
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1.91 |
1.91 |
45.3 |
-0.36 |
0.34 |
13.9 |
76 |
6 |
1 |
3 |
8 |
5 |
1 |
0 |
HEM 701 B GZO 702 B
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6 |
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1.23 |
1.23 |
50.0 |
-0.88 |
-0.36 |
17.9 |
86 |
6 |
4 |
4 |
9 |
1 |
0 |
0 |
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7 |
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1.48 |
3.22 |
55.9 |
0.39 |
0.54 |
12.6 |
75 |
6 |
1 |
2 |
13 |
4 |
2 |
0 |
HEM 701 B GZO 702 B NO 703 B
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8 |
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1.24 |
1.23 |
57.5 |
-0.40 |
0.19 |
14.7 |
77 |
8 |
2 |
5 |
10 |
5 |
2 |
0 |
HEM 701 B GZO 702 B NO 703 B
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9 |
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1.13 |
1.13 |
70.6 |
0.25 |
-0.14 |
5.7 |
81 |
3 |
1 |
3 |
8 |
4 |
2 |
1 |
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10 |
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1.18 |
1.20 |
76.4 |
-1.41 |
-0.36 |
20.1 |
83 |
6 |
3 |
3 |
4 |
1 |
3 |
0 |
G2P 1001 A MG 1002 A MG 1003 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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