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PDBsum entry 8hah

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 8hah calculated with MOLE 2.0 PDB id
8hah
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.86 71.9 -0.50 -0.29 8.9 80 3 4 4 10 4 0 0  DA 170 I DA 171 I DC 172 I DG 173 I DT 10 J DT 11
J DC 13 J DC 14 J
2 1.90 1.90 20.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  DA 18 I DT 19 I DG 164 J DG 165 J DC 166 J

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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