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PDBsum entry 8ha0

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8ha0 calculated with MOLE 2.0 PDB id
8ha0
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.79 1.79 34.2 -1.96 -0.27 26.5 83 7 1 1 4 0 0 1  
2 1.16 1.43 39.7 -0.33 -0.19 11.2 79 4 0 1 3 2 1 1  
3 2.40 2.39 59.7 -2.00 -0.47 24.2 81 9 4 2 2 3 0 0  
4 1.15 1.43 62.7 -0.89 -0.42 11.9 82 5 3 7 6 4 3 2  
5 1.44 1.78 66.4 -1.88 -0.33 21.7 87 10 3 7 7 2 1 0  
6 2.01 3.83 72.8 -1.20 -0.40 15.6 81 9 3 6 5 4 2 3  
7 2.10 3.36 73.8 -2.11 -0.67 18.2 88 7 4 9 2 1 0 0  
8 1.57 1.57 85.1 -1.14 -0.34 15.8 84 7 2 5 7 1 1 0  
9 1.52 1.52 110.9 -1.62 -0.50 18.2 87 10 4 12 6 4 0 1  
10 1.94 1.94 41.8 -0.89 -0.40 17.8 84 1 4 2 3 2 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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