PDBsum entry 8h40 Go to PDB code:  Pore analysis for: 8h40 calculated with MOLE 2.0 PDB id 8h40 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 4.15 4.27 48.8 -1.69 -0.36 23.8 84 5 6 6 7 2 0 0   2 1.50 2.52 67.4 0.95 0.39 11.5 82 5 3 5 21 4 0 0   3 2.24 2.56 78.2 -1.18 -0.21 19.4 87 9 7 8 10 1 1 0   4 1.28 1.48 81.7 0.19 0.05 11.4 83 7 1 5 14 1 0 0   5 3.11 4.63 87.2 -1.78 -0.43 20.2 85 9 12 10 10 0 4 0  DC 114 1 6 1.22 1.29 96.0 -1.49 -0.52 17.1 89 8 6 12 8 0 2 0   7 2.24 2.58 99.7 -1.20 -0.26 19.3 87 10 8 9 9 2 1 0   8 2.59 2.50 103.7 -1.88 -0.50 19.1 85 9 12 13 10 1 4 0  DC 114 1 9 2.20 2.21 130.6 -1.97 -0.52 22.5 86 17 8 11 7 2 0 0  DT 93 1 DT 94 1 DT 37 2 10 1.25 1.54 138.9 -2.18 -0.38 26.1 79 18 7 7 8 4 3 0  DT 93 1 DT 94 1 DT 37 2 11 1.26 1.26 135.9 -1.27 -0.31 21.7 85 18 7 8 12 2 1 0  DT 93 1 DT 94 1 DT 37 2 12 1.31 1.72 156.3 -1.09 -0.31 18.0 83 16 9 7 13 3 4 0  DA 103 1 DT 104 1 DG 106 1 DG 107 1 DA 108 1 DG 109 1 DC 110 1 DG 112 1 DT 113 1 DC 114 1 DT 7 2 DC 8 2 DG 10 2 13 1.26 1.19 160.2 -1.33 -0.11 18.9 82 16 9 10 11 5 0 0   14 1.24 1.54 166.5 -0.90 0.00 20.9 80 14 6 6 21 7 2 0   15 1.81 3.13 164.9 -1.45 -0.22 22.5 81 19 9 9 12 5 2 0  DT 93 1 DT 94 1 DT 37 2 16 1.24 1.23 166.9 -1.10 -0.33 16.5 84 17 11 13 19 4 4 0  DC 114 1 DA 13 2 17 1.78 3.08 191.6 -1.60 -0.32 21.1 82 17 14 16 15 5 3 0   18 1.35 1.54 193.8 -0.73 -0.14 17.5 83 20 8 14 28 7 2 0  DA 103 1 DA 26 2 DA 27 2 19 1.25 1.25 196.9 -1.12 -0.18 20.6 82 18 13 13 22 5 4 0   20 1.18 1.28 213.4 -1.04 -0.16 20.7 82 18 8 8 25 5 1 0  DA 73 1 21 2.20 2.19 197.1 -1.60 -0.47 18.8 85 20 8 16 13 4 3 0  DT 93 1 DT 94 1 DC 110 1 DG 112 1 DT 113 1 DC 114 1 DT 7 2 DC 8 2 DG 10 2 DT 11 2 DT 37 2 22 2.06 2.33 213.5 -1.97 -0.37 22.7 80 27 16 17 11 9 2 0  DT 93 1 DT 94 1 DT 37 2 23 1.48 2.26 226.5 -0.97 -0.22 16.7 85 15 15 22 27 5 4 0   24 1.35 1.49 224.4 -1.71 -0.37 22.2 83 25 17 16 20 5 1 0  DC 83 1 DA 84 1 25 1.20 1.37 229.6 -1.34 -0.27 21.8 83 25 16 13 25 5 2 0  DC 83 1 DA 84 1 26 1.97 3.51 243.8 -1.52 -0.20 22.5 78 21 21 15 18 12 3 0   27 2.01 3.41 258.1 -1.43 -0.34 18.8 83 20 15 21 22 7 6 0  DC 110 1 DG 112 1 DT 113 1 DC 114 1 DT 7 2 DC 8 2 DG 10 2 DT 11 2 28 1.28 1.89 279.0 -1.41 -0.30 18.4 83 26 13 15 17 9 5 0  DA 103 1 DT 104 1 DG 106 1 DG 107 1 DA 108 1 DG 109 1 DC 110 1 DG 10 2 DT 11 2 DG 12 2 DA 13 2 29 1.41 1.40 290.9 -1.56 -0.38 19.7 83 28 17 21 26 7 4 0  DC 83 1 DA 84 1 DC 110 1 DG 112 1 DT 113 1 DT 7 2 DC 8 2 DG 10 2 DT 11 2 30 1.41 1.52 317.1 -1.47 -0.26 21.9 80 27 23 18 25 12 3 0  DA 73 1 31 1.43 2.90 46.9 1.23 0.36 6.4 77 1 4 2 14 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.