PDBsum entry 8h3v Go to PDB code:  Pore analysis for: 8h3v calculated with MOLE 2.0 PDB id 8h3v Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 2.35 46.9 1.74 0.41 7.4 77 1 3 0 10 1 0 0   2 1.18 2.36 70.8 0.69 0.08 12.0 81 3 5 2 14 0 0 0   3 1.53 1.53 100.9 -2.02 -0.45 26.8 85 10 7 9 6 1 0 0  DT 12 1 DG 13 1 DC 14 1 DA 15 1 DT 108 2 DT 109 2 DA 114 2 4 1.95 1.94 121.1 -1.29 -0.12 17.7 78 5 4 5 6 6 1 0   5 3.39 3.53 131.6 -0.81 -0.20 18.0 84 14 9 12 17 1 2 0  DC 114 1 DA 115 1 6 1.25 2.44 133.7 -1.54 -0.21 23.6 78 11 8 6 14 3 1 0   7 1.78 1.78 132.8 -1.00 -0.21 18.3 80 7 5 3 9 3 2 0   8 1.50 1.47 156.5 -1.71 -0.30 24.6 79 15 12 8 13 2 0 0  DT 12 1 DG 13 1 DC 14 1 DA 15 1 DT 108 2 DT 109 2 DA 114 2 9 1.40 1.41 174.6 -1.73 -0.34 24.5 81 18 14 12 19 1 0 0   10 1.19 2.26 181.2 -1.71 -0.34 26.8 80 20 11 9 15 3 1 0  DT 12 1 DG 13 1 DC 14 1 DA 15 1 DT 108 2 DT 109 2 DA 114 2 11 2.51 2.66 185.4 -1.60 -0.33 22.8 81 13 17 7 12 3 8 0   12 1.21 1.47 208.3 -1.91 -0.36 21.5 79 27 10 11 10 3 5 0  DC 110 1 DT 113 1 DG 121 1 DC 122 1 DC 9 2 DG 10 2 13 1.18 2.14 217.5 -1.24 -0.40 15.1 81 24 6 13 15 4 9 0  DA 102 1 DA 103 1 DT 104 1 DG 105 1 DG 106 1 DG 107 1 DA 108 1 DG 109 1 DC 110 1 14 1.73 1.73 226.2 -1.42 -0.23 17.5 79 11 10 8 12 8 4 0   15 1.17 2.44 223.5 -0.57 -0.16 16.6 84 21 7 8 26 1 2 0  DA 102 1 DA 103 1 DT 104 1 DG 105 1 DG 106 1 DG 107 1 DA 108 1 DG 109 1 DC 110 1 DG 112 1 DT 113 1 DC 114 1 DC 8 2 DC 9 2 DG 10 2 16 1.37 1.44 242.3 -1.10 -0.25 18.8 83 26 12 16 24 5 3 0  DA 102 1 DA 103 1 DT 104 1 DG 105 1 DG 106 1 DG 107 1 DA 27 2 17 1.17 2.25 253.5 -1.41 -0.27 20.7 80 18 20 8 18 5 7 0   18 1.30 1.30 259.3 -1.39 -0.30 19.3 81 17 17 16 22 7 6 0   19 2.09 2.08 267.1 -1.38 -0.26 19.7 78 14 16 9 13 8 9 0   20 1.45 1.54 267.8 -1.87 -0.33 22.4 79 19 17 11 12 5 2 0   21 1.24 2.40 273.6 -1.95 -0.42 21.1 81 28 15 19 12 7 7 0   22 1.39 1.40 306.3 -2.31 -0.46 27.1 80 25 20 10 11 5 4 0   23 1.51 1.54 320.0 -1.97 -0.42 25.0 80 28 20 14 13 5 2 0  DT 12 1 DG 13 1 DC 14 1 DA 15 1 DT 108 2 DT 109 2 DA 114 2 24 1.63 1.69 320.7 -2.05 -0.41 22.1 79 30 19 19 13 6 6 0   25 2.08 2.79 360.3 -2.17 -0.48 27.3 80 34 24 13 12 5 4 0  DT 12 1 DG 13 1 DC 14 1 DA 15 1 DT 108 2 DT 109 2 DA 114 2 26 1.24 1.47 366.6 -1.71 -0.36 23.2 81 34 18 17 18 6 3 1  DA 35 2 DT 36 2 DT 37 2 27 2.49 2.71 360.5 -2.14 -0.47 24.1 80 37 22 22 14 6 6 0  DT 12 1 DG 13 1 DC 14 1 DA 15 1 DT 108 2 DT 109 2 DA 114 2 28 1.22 2.32 393.0 -1.43 -0.31 20.7 82 39 16 23 27 9 7 0  DA 102 1 DA 103 1 DT 104 1 DG 105 1 DG 106 1 DG 107 1 DA 27 2 29 1.58 1.86 396.8 -1.59 -0.35 19.9 80 29 24 21 21 8 6 0  DC 110 1 DG 112 1 DT 113 1 DC 114 1 DC 8 2 DC 9 2 DG 10 2 30 1.41 1.46 468.9 -1.63 -0.35 23.2 81 48 22 25 27 7 3 0  DT 12 1 DG 13 1 DC 14 1 DA 15 1 DA 102 1 DA 103 1 DT 104 1 DG 105 1 DG 106 1 DG 107 1 DA 27 2 DT 108 2 DT 109 2 DA 114 2 31 1.78 1.78 28.1 -0.67 -0.74 6.6 87 1 0 1 0 0 0 0  DA 50 1 DT 51 1 DA 52 1 DC 53 1 DG 54 1 DA 75 2 DT 76 2 DT 77 2 DA 78 2 DA 79 2 DT 80 2 Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.