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PDBsum entry 8h2c

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8h2c calculated with MOLE 2.0 PDB id
8h2c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.67 23.9 -1.17 -0.23 14.2 77 3 2 3 0 3 1 0  
2 2.45 3.30 24.9 -0.90 -0.07 19.0 85 4 2 5 1 3 0 0  MN 401 D
3 1.17 1.17 43.9 -0.89 -0.39 13.8 79 4 4 4 4 2 0 1  
4 1.69 1.87 15.3 -1.48 -0.29 21.9 77 2 3 2 1 2 0 0  
5 1.68 2.09 21.4 -2.10 -0.57 27.3 80 4 6 2 1 2 0 0  
6 1.45 2.40 20.3 -1.72 -0.59 26.4 86 2 4 2 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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