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PDBsum entry 8h0y

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Pore analysis for: 8h0y calculated with MOLE 2.0 PDB id
8h0y
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.19 2.05 44.9 -2.30 -0.52 21.0 78 4 6 5 0 4 2 0  
2 2.79 4.03 49.5 -2.44 -0.45 24.8 78 5 8 6 0 4 3 0  
3 2.02 2.40 50.2 -1.88 -0.45 18.2 82 5 7 6 4 1 1 0  
4 1.61 1.82 57.5 -1.79 -0.49 21.5 87 7 6 9 1 3 1 0  
5 2.51 2.80 61.2 -0.80 -0.30 17.9 83 6 8 4 9 0 0 0  
6 1.17 1.17 67.8 -2.14 -0.41 26.8 78 10 7 3 4 5 2 0  
7 2.54 2.80 68.2 -0.87 -0.39 17.3 85 6 10 6 11 0 0 0  
8 2.45 3.80 68.5 -1.63 -0.17 22.9 77 6 8 5 2 6 3 0  BLA 1317 A
9 1.19 2.07 70.9 -1.05 -0.25 10.8 79 3 4 8 4 4 1 0  
10 2.07 2.43 80.0 -1.48 -0.30 15.9 81 4 8 10 3 5 2 0  
11 1.93 2.95 85.1 -1.41 -0.36 20.5 86 9 8 10 6 3 1 0  
12 1.72 1.73 89.2 -2.03 -0.55 20.1 84 7 8 9 5 2 1 0  
13 1.18 2.15 91.2 -1.26 -0.27 20.6 78 6 9 8 5 6 1 0  
14 1.17 2.14 92.3 -1.33 -0.31 18.7 80 7 8 9 5 6 1 0  
15 2.54 2.80 91.8 -1.24 -0.41 21.8 84 10 12 4 12 0 0 0  
16 3.03 3.39 92.7 -1.82 -0.44 27.1 80 9 11 9 6 2 1 0  
17 2.83 4.07 94.6 -1.39 -0.25 23.0 77 7 10 7 5 6 2 0  
18 2.04 2.41 96.3 -1.20 -0.27 21.1 81 7 9 9 8 3 0 0  
19 2.95 3.35 101.3 -2.07 -0.46 28.3 81 10 14 9 6 2 2 0  
20 2.82 4.06 111.7 -1.79 -0.35 24.9 78 10 12 8 5 6 3 0  
21 1.74 1.73 112.8 -2.09 -0.66 21.9 87 9 5 12 4 2 0 0  
22 2.47 3.78 119.1 -1.13 -0.19 22.0 76 8 11 8 8 9 2 0  BLA 1317 A
23 1.43 1.42 126.4 -1.37 -0.30 16.9 80 7 7 10 6 8 2 0  BLA 1317 A
24 2.44 3.62 127.7 -1.47 -0.25 23.3 77 9 14 8 8 9 3 0  BLA 1317 A
25 1.55 2.58 128.0 -2.05 -0.49 25.9 81 13 12 7 5 5 3 0  
26 2.07 2.44 131.4 -1.61 -0.38 22.1 83 10 13 14 8 3 1 0  
27 2.28 2.35 135.8 -1.78 -0.45 23.5 83 12 15 13 10 4 1 0  
28 2.38 2.46 137.3 -2.25 -0.61 22.3 85 14 9 15 5 2 1 0  
29 1.77 1.77 142.4 -1.68 -0.45 22.7 82 10 15 11 10 4 1 0  
30 2.33 2.78 144.6 -1.67 -0.44 22.6 84 12 13 14 10 4 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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