spacer
spacer

PDBsum entry 8glg

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 8glg calculated with MOLE 2.0 PDB id
8glg
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.86 1.88 32.6 1.78 0.79 3.7 75 1 0 0 9 5 0 1  L9Q 601 A CUY 603 A
2 1.42 1.67 34.3 0.73 0.46 6.8 77 1 0 3 5 5 0 0  L9Q 601 A CUY 603 A CL 604 A
3 1.33 1.37 35.6 0.29 0.28 8.7 80 2 2 3 5 4 0 0  L9Q 601 A CUY 603 A
4 1.55 1.72 42.7 1.89 0.76 4.7 74 2 0 0 12 6 0 1  L9Q 601 A CUY 603 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer