PDBsum entry 8ggx Go to PDB code:  Tunnel analysis for: 8ggx calculated with MOLE 2.0 PDB id 8ggx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 1.17 22.4 1.37 0.57 1.2 84 0 0 3 6 2 1 0   2 1.15 1.17 24.4 1.18 0.65 3.0 86 2 0 3 5 2 1 0   3 1.17 1.18 24.7 1.39 0.61 1.2 82 0 0 3 7 2 1 0   4 1.15 1.17 26.6 1.46 0.60 1.2 80 0 0 3 7 3 1 0   5 1.15 1.17 28.5 1.29 0.64 3.1 82 2 0 3 6 3 1 0   6 1.04 2.48 40.8 1.16 0.64 9.1 77 2 2 2 6 6 1 0  G1I 501 R 7 1.10 2.56 44.2 0.89 0.39 6.2 70 1 2 3 4 8 0 3  G1I 501 R 8 1.15 1.52 51.9 0.60 0.40 9.9 78 3 2 3 5 7 0 0  G1I 501 R 9 1.15 1.53 56.8 0.71 0.37 7.7 70 1 2 4 5 9 1 3  G1I 501 R Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.