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PDBsum entry 8g0b

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8g0b calculated with MOLE 2.0 PDB id
8g0b
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 1.43 32.4 -0.97 -0.60 16.3 83 2 2 2 5 2 0 0  
2 1.41 1.41 36.2 -0.37 -0.45 12.9 88 2 1 2 9 1 0 0  
3 2.72 4.67 48.2 2.11 1.00 1.6 71 0 1 0 6 6 1 0  YGR 601 4 YGR 601 5
4 2.28 4.30 70.5 3.27 1.38 2.3 94 4 0 7 44 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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