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PDBsum entry 8fy8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 8fy8 calculated with MOLE 2.0 PDB id
8fy8
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.14 1.31 41.3 -1.57 -0.72 17.1 90 2 3 3 4 0 0 0  
2 1.48 1.46 46.7 -2.21 -0.80 24.4 84 7 7 4 2 0 0 0  
3 1.79 2.07 93.9 -1.56 -0.33 20.3 78 11 5 4 3 4 3 2  
4 1.51 1.49 96.2 -1.59 -0.60 22.4 86 12 7 4 9 0 0 0  
5 1.15 1.34 98.7 -1.47 -0.63 18.8 87 11 8 6 6 0 0 0  
6 1.20 1.38 112.6 -1.56 -0.60 19.1 89 12 7 8 7 1 0 0  
7 1.48 1.62 111.4 -1.74 -0.58 23.1 87 13 7 6 10 1 0 0  
8 1.47 1.64 136.8 -1.76 -0.58 22.9 88 15 9 8 10 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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