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PDBsum entry 8fv4

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 8fv4 calculated with MOLE 2.0 PDB id
8fv4
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.36 2.36 39.6 -1.82 -0.50 26.5 77 6 5 0 3 0 0 1  YAA 1101 D
2 1.26 1.64 67.9 -0.95 -0.38 19.2 85 5 7 3 10 0 1 0  
3 1.46 1.47 77.0 -0.76 -0.35 15.3 77 7 4 2 8 2 2 1  MG 1101 A ANP 1102 A
4 1.30 1.58 98.2 -1.51 -0.34 25.1 77 15 5 1 14 2 2 2  YAA 1101 D
5 1.38 1.89 104.6 -1.16 -0.30 23.1 75 16 7 1 16 0 1 2  ANP 1102 C YAA 1101 D
6 1.48 1.51 126.5 -1.42 -0.21 25.8 81 14 9 4 9 1 2 0  
7 1.45 1.45 142.3 -1.47 -0.31 25.4 78 16 8 3 11 1 2 1  YAA 1101 D
8 1.34 1.57 144.2 -1.27 -0.26 23.2 80 15 7 4 13 3 2 1  
9 1.24 1.62 157.3 -0.98 -0.34 19.5 82 14 5 5 12 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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